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Biology 1010

Fall 2009


Ecosystem Ecology


An ecosystem is a community of organisms interacting within a particular physical environment. Stated another way, an ecosystem is a community plus its abiotic factors, e.g. soil, rain, temperatures, etc.

I. The earth 

A. Hydrosphere - the zone of water that covers three-quarters of the earth

1. Sunlight drives the water cycle

2. Water evaporates from oceans, rivers and living communities to become clouds

3. Water condenses and precipitation cycles through freshwater habitats as it returns to the ocean

4. The ability of water to absorb and release great quantities of heat keeps climate within livable range

B. Atmosphere - the gaseous layer near earth

1. The atmosphere is concentrated in the lowest 10 kilometers but extends thinly out to 1,000 km

2. Major gases in the atmosphere are nitrogen, oxygen and carbon dioxide

3. Carbon dioxide is a prime input for photosynthesis

4. Oxygen is involved in cellular respiration, and in the upper atmosphere becomes protective ozone (O3)

C. Lithosphere - a rocky substratum that extends about 100 kilometers deep

1. Weathering of rocks supplies minerals to plants and eventually forms soil

2. Soil contains decayed organic material (humus) that recycles nutrients to plants

D. Biosphere - the thin layer where life is possible between the outer atmosphere and the lithosphere

II.  Biotic components of an ecosystem

A. The organisms in an ecosystem are either autotrophs or heterotrophs:

B. Autotrophic organisms - capture energy (e.g., sunlight) and incorporate it into organic compounds; therefore they are also called producers

1. Chemoautotrophs are bacteria that obtain energy from oxidation of inorganic compounds such as ammonia, nitrites, and sulfides; they synthesize carbohydrates and are found in cave communities and ocean depths

2. Photoautotrophs possess chlorophyll and carry on photosynthesis

3. Autotrophs are at the beginning or bottom of a food chain

4. In terrestrial ecosystems, producers are mostly plants; in aquatic ecosystems, dominant producers are algae

D. Heterotrophic organisms - need a source of preformed nutrients and consume tissues of other organisms

1. Herbivores are animals that feed directly on green plants (e.g., caterpillars, zooplankton, etc.)

2. Carnivores are animals that eat other animals (e.g., lion, hawks, etc.)

3. Sequences of carnivores that feed in a chain can be labeled primary, secondary and tertiary consumers:

a. Primary consumers are herbivores

b. Secondary consumers eat the herbivores

c. Tertiary consumers feed on secondary carnivores

4. Omnivores -  feed upon a variety of organisms, including plants and animals (e.g., human)

5. Detritivores - animals (e.g., earthworms) that feed on detritus - the decomposing products of organisms. Decomposition returns nutrients back to the soil. Some also recognize decomposers but there is little distinction between them and detritivores

I. Energy flow and nutrient cycling 

A. Ecosystems

1. Ecosystems are dependent upon solar energy flow and finite pools of nutrients

2. Carbon, hydrogen, nitrogen, oxygen, phosphorus and sulfur make up over 98 percent of body weight of life

3. Plants can make use of inorganic nutrients while animals must take in organic nutrients

4. Primary productivity is the total amount of energy an ecosystem's producers capture within plant material over a length of time

a. Soil, climate, and other factors affect gross primary productivity

b. Plants must use organic molecules to fuel their own cellular respiration, about 55%

c. 55% of gross primary productivity is available to heterotrophs; this is net primary productivity

5. Energy flow in an ecosystem is a consequence of two fundamental laws of thermodynamics:

a. First law of thermodynamics - energy can neither be created nor destroyed; it can only be changed from one form of energy to another.

b. Second law of thermodynamics - when energy is transformed from one form to another, there is always some loss of energy from the system, usually as low grade heat

6. Therefore, ecosystems are unable to function unless they receive a constant input of energy

a. Primary source of energy for ecosystems is sunlight, which photosynthesizers use to produce organic food

b. All energy content of organic matter is eventually lost to environment as low grade heat

c. Only a small portion of food taken in by heterotrophs becomes available to the next consumer

d. Secondary productivity - the portion of energy converted into increased body weight 

B. Food webs

1. The complex feeding relationships that exist in nature are called food webs

2. A grazing food web begins with leaves, stems and seeds eaten by herbivores and omnivores

3. A detritus food web begins with detritus, followed by decomposers (including bacteria and fungi)

4. Detritus food chains are connected to a grazing food chain when consumers of a grazing food chain feed on the decomposers of the detrital food chain

5. In some ecosystems, less than 1% of energy may move through the grazing food web while over 99% moves through the detritus food web

C. Trophic levels

1. A food chain represents passage of energy through populations in a community

2. Trophic level - a feeding level of one or more populations in a food web; those organisms in an ecosystem that are the same number of food chain steps from the energy input into the system:

a. First trophic level - primary producers

b. Second trophic level - all the primary consumers

c. Third trophic level - all the secondary consumers

E. Ecological pyramids

1. An ecological pyramid shows the trophic structure of an ecosystem as a graph representing biomass, organism number, or energy content of each trophic level in a food web

2. The base of the pyramid represents the producer trophic level, and from there the consumer trophic level is stacked, with the apex representing the highest consumer trophic level

3. A pyramid of numbers is based on the number of organisms in each trophic level

4. A pyramid of biomass is based on the weight (biomass) of organisms at each trophic level at one time

a. Usually a large mass of plants supports a medium mass of herbivores and a small mass of carnivores

5. A pyramid of energy is based on the total amount of energy in each trophic level and is always pyramidal

6. In general, about 10 percent of energy at a particular trophic level is incorporated into the next trophic level

a. Thus, 1,000 kg (or kcal in an energy pyramid) of plant material converts to 100 kg of herbivore tissue, which converts to 10 kg of first carnivores, which can support 1 kg of second level carnivores

b. This rapid loss of energy is the reason food chains have from three to four links, rarely five

c. This rapid loss of energy is also the reason there are few large carnivores

7. Energy pyramid concept helps explain the phenomenon of biological magnification - the tendency for toxic substances to increase in concentration at progressively higher levels of the food chain.

For example, DDT was once a widely used insecticide. However when washed off croplands into streams and lakes it became concentrated in fish that were ultimately eaten by birds such as bald eagles. The DDT caused fragile eggs such that populations of large predator birds rapidly declined. Since DDT was banned in the US in 1968 bird populations have made dramatic comebacks

IV. Global biogeochemical cycles 

A. Despite an inexhaustible influx of energy from the sun, the continuation of life depends on the recycling of essential chemical elements, primarily carbon, oxygen, nitrogen, water and phosphorous

B. The cycling of nutrients in within ecosystems is second in importance only to the transformation of energy via photosynthesis

C. Biogeochemical cycles - global loops of nutrient recycling. They involve both biotic and abiotic components of ecosystems

    D. Hydrologic (water) cycle

    1. In the (hydrologic) cycle, freshwater evaporates and condenses on the earth

    a. Oceans are the greatest source of evaporated water, but water also evaporates from bodies of freshwater, and from land and plants (transpiration)

    2. Evaporation of water from the oceans leaves behind salts

    3. Rainfall that permeates the earth forms a water table at the surface of the groundwater

    4. An aquifer is an underground storage of freshwater in porous rock, trapped by impervious rock strata

    5. Freshwater, which makes up only about 3 percent of the world's supply of water, is called a renewable resource

    6. Freshwater can become unavailable when consumption exceeds supply and/or is polluted so it is not usable

    E. Carbon cycle 

      1. The exchange pool for the carbon cycle is the atmosphere

      2. Photosynthesis removes CO2 from the atmosphere; respiration and combustion add CO2 to the atmosphere

      3. CO2 from the air combines with water to produce bicarbonate (HCO3), which is a source of carbon for aquatic producers, primarily algae

      4. Similarly, when aquatic organisms respire, the CO2 they release combines with water to form HCO3

      5. The amount of bicarbonate in the water is in equilibrium with the amount of CO2 in the air

      6. The reservoir for the carbon cycle is largely composed of organic matter, calcium carbonate in shells, and limestone, as well as fossil fuels

      7. The carbon cycle involves:

a. Short term cycling of carbon through living organisms via photosynthesis, respiration and decay

b. Longer cycles involving reduced organic deposits (fossil fuels)

c. Very long term cycling via land and sea through crustal folding and solutions of limestone and dolomites

    F. Nitrogen cycle 

    1. Nitrogen gas (N2) comprises about 78 percent of the atmosphere, yet nitrogen deficiency often limits plant growth

    2. Atmospheric nitrogen is fixed (N2 is reduced and added to organic compounds), primarily via soil bacteria, which make it available to plants and then other organisms 

    3. When these organisms die or leave waste products certain other bacteria and fungi return the nitrogen to the soil and atmosphere

    4. Nitrogen is often the limiting factor in agricultural productivity. Agriculture quickly depletes soil nitrogen so nitrogen fertilizers are constantly being added

    Eutrophication (over enrichment) results from fertilizer runoff; when rampant algae dies off, decomposers use up available oxygen during cellular respiration, and this results in a massive fish kill

    G. Phosphorus cycle

    1. Weathering makes phosphate ions available to plants from the soil

    2. Some of this phosphate runs off into aquatic ecosystems where algae incorporate it into organic molecules

    3. The phosphate that is not taken up by aquatic phototrophs is incorporated into sediments in the oceans

    4. Sediment phosphate becomes available when a geological upheaval exposes sedimentary rocks to weathering

    5. The phosphate taken up by producers is incorporated into a variety of organic compounds

    6. Animals eat producers and incorporate some of phosphate into teeth, bones, and shells that take long to decompose

    7. Death and decay of organisms and decomposition of animal wastes makes phosphate ions available again

    8. Because available phosphate is generally taken up quickly, it is usually a limiting nutrient in most ecosystems

V. Causes of pollution

A. Human activities impact biogeochemical cycles and ecosystems

B. Pumping water from aquifers is not a normal part of the water cycle

C. Burning fossil fuels and trees is increasing the amount of carbon dioxide in the atmosphere

D. Phosphorus cycle is affected if we produce detergents; nitrogen cycle is affected when we produce fertilizers

E. Human activities affect the transfer rates by moving one element from one component of the ecosystem to another at a rate greater than natural transfer rates

1. Transfer rate = amount of nutrient moving from one part of the environment to another in a time period

F. Pollution can be defined as a change in transfer rate that can lead directly or indirectly to a degradation of human health or a degradation of plant and animal life

VI. Global warming

A. Atmospheric gases, primarily carbon dioxide, water, ozone, methane, nitrous oxide and chlorofluorocarbons, act like a "pane of glass" over the earth, much like a greenhouse

B. These "greenhouse gases" trap some of the sun's energy, keeping the earth at about a comfortable 60oF.  Without these gases the earth would be too cold to support life as we know it

C. However, an increase in greenhouse gases would trap more of the sun's energy, much like an insulating blanket, causing temperatures on earth to increase. This is called global warming

D. Visit the U.S. Environmental Protection Agency Global Warming Site for a comprehensive review of global warming and its projected impact

E. Over the course of many millions of years plants took carbon out of the atmosphere and fixed it into fossil fuels. The increased use of fossil fuels since the beginning of the industrial revolution has caused an alarming increase in the amount of carbon dioxide in the atmosphere

F. Deforestation, particularly in the tropics has a two fold effect on global warming:

1. Most of the deforestation is by burning, which releases vast amounts of carbon into the atmosphere

2. Since plants take carbon out of the atmosphere, deforestation keeps atmospheric carbon dioxide levels higher

G. Currently, the oceans act as "sinks" by absorbing some atmospheric carbon dioxide. However, warming of the oceans may convert them from sinks to sources of atmospheric carbon dioxide because the solubility of carbon dioxide in water decreases with increasing temperatures. This means more carbon dioxide would be added to the atmosphere, increasing the greenhouse effect

H. Why should you care about global warming?

1. Polar ice caps will melt, flooding vast coastal areas around the world

2.There will probably be an increase in infectious diseases. As temperatures rise, disease-carrying mosquitoes and rodents spread, infecting people in their wake

3. Climatic patterns will change, affecting agricultural output