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Diagnostic: Gram negative pathogens

Reference: http://education.med.nyu.edu/courses/old/microbiology/courseware/infect-disease/

Laboratory Diagnosis

p   Biochemical tests and serological tests must be done in parallel

p   Commercial kits commonly used

 

Gram Negative Aerobic Cocci

p   Neisseria, Moraxella and Acinetobacter.

p   two important human pathogens in the genus Neisseria

Neisseria gonorrhoeae

p     fragile organism

n    cannot survive in environment

n    no animal reservoir

p     Gram-negative diplococcus

n    kidney bean shaped

n    often intracellular in clinical samples

p     Causes gonorrhea

p     Other diseases:

n    urethritis, cervicitis, salpingitis, proctitis, pharyngitis, conjuntivitis, pharyngitis, PID - pelvic inflammatory disease, arthritis, disseminated disease

Neisseria meningitidis

p   Meningitis (epidemic CNS fever)

n   septicemia, pneumonia, arthritis, urethritis

n   acute inflammatory changes due to immune responses

n   Septic manifestations include

p  disseminated intravasuclar coagulation

p  damage leads to shock.

n   Laboratory Diagnosis:

p  culture from blood, CSF, or transtracheal aspirates isolation.

 

p   Previously considered harmless,

n   Moraxella catarrhalis

p  recently shown to cause human infections

p  bronchitis and bronchopneumonia

 

p   Most Neisseria, Moraxella and Acinetobacter

n   can grow on simple media at varying temperatures.

 

p   N. meningitidis and N. gonorrhoeae

n   sensitive to fatty acids and trace metals in simple media

n   requirements for growth

p  enriched medium containing blood or blood products.

p  carbon dioxide atmosphere

p  incubation at 37 °C

 

Properties useful in distinguishing among the Gram negative cocci

p     Oxidase test

n     detects presence of cytochrome oxidase using a dye.

p    dye is colorless in reduced state

p    purple in the oxidized state.

 

p   Neisseria and Moraxella

n   Give positive oxidase test

n   Commonly used for presumptive identification of species.

2. Ability to grow on NYC media

-an enriched media containing antibiotics ( vancomycin, colistin, nystatin, and trimethoprim)

-permits growth of N. meningitidis and N. gonorrhoeae but not nonpathogenic Neisseria, Moraxella catarrhalis and other gram negative organisms

 

p   Neisseria meningitidis on NYC agar

p    Neisseria gonorrhoeae on NYC agar

 

p      carbohydrate degradation

p     oxidative breakdown of sugars glucose, maltose and sucrose

p     can help distinquish among N. meningitidis, N. gonorrhoeae, and M. catarrhalis.

 

Uninoculated sugar media

 

p      Neisseria meningitidis sugar utilization

n      + glucose, maltose

n      - sucrose

 

p   Neisseria gonorrhoeae sugar utilization

n   + glucose

n   - maltose, sucrose

 

p   Moraxella catarrhalis sugar utilization

n   - for all 3 sugars

 

Gram Negative Bacilli

p        organisms in this group

n        Enterobacteriaceae

p      family containing many important pathogenic genera

n        Vibrio, Campylobacter and Helicobacter

n        Opportunistic organisms

n        Pseudomonas and others

n        Haemophilus and Bordetella

Examples of organisms and diseases they cause

p     Escherichia coli

n    diarrhea, urinary tract infection, meningitis in newborn, and range of nosocomial infections

p     Shigella species

n    invasive diarrheal disease - dysentery

p     Salmonella typhi

n    typhoid fever - enteric fever

p     Yersinia pestis

n    Plague

p     Vibrio cholerae

n    cholera

p     Campylobacter jejuni

n    enterocolitis

 

GROWTH on MacConkey agar

p   Selects against some bacteria:

n   Haemophilus, Bordetella, Campylobacter, and Helicobacter do not grow

n   Enterobacteriaceae, Pseudomonas, and Vibrio grow readily

p   differentiates among most Gram negative bacilli

n   ability to utilize lactose

 

Enteric Gram-negative rods

p    Lactose-fermenters

n    Escherichia coli

n    Klebsiella pneumoniae

p    Non-lactose fermenters

n    Salmonella enterica

n    Shigella spp.

n    Proteus mirabilis

n    Pseudomonas aeruginosa

p   Enterobacteriaceae (enterics)

n   facultative Gram-negative rod-shaped bacteria

n   inhabit intestinal tracts of humans and many animals. 

p  coliforms

§    ferment lactose (lactose positive)
§    nonnpathogenic in the intestinal tract
§    Escherichia coli, Enterobacter aerogenes
§    Note: E. coli O157:H7 - implicated in causing bloody diarrhea.)

p  enteric pathogens Salmonella and Shigella

§    unable to ferment lactose (lactose negative).

 

Organisms which DO NOT GROW on MacConkey agar

Fastidious Gram-negative rods

p    Often pleomorphic coccobacilli

p    Require enriched media (i.e. chocolate agar) for growth

p    Do not grow on MacConkey agar

p    Growth enhanced by incubation with carbon dioxide

p    Examples:

n    Haemophilus influenzae

n    Bordetella pertussis

Haemophilus species

p        Haemophilus influenza DISEASES

n        Pneumonia, meningitis, epiglottitis, septic arthritis, cellulitis, otitis media, conjunctivitis, neonatal infection, and other clinical syndromes

n        Source: Human respiratory and genital tract by direct contact or inhalation.

n        Pathogenesis: Infection results in a primary bacteremia followed by acute pyogenic infection.

n        Laboratory Diagnosis: cultures from blood, CSF, joint fluid, and biopsy material.

p        Infections by other Haemophilus species

n        Diseases: Conjunctivitis, genital ulcer, endocarditis, brain abscess, pneumonia, and other syndromes.

n        Etiologic Agents: H. parainfluenza and other species.

n        Source: Human respiratory and genital tract by direct contact or inhalation.

n        Pathogenesis: Acute pyogenic infections

n        Laboratory Diagnosis: Isolation of the organism from blood, sputum, tissue or mucosal swab.

Chocolate agar

p    nutrient medium for culturing fastidious organisms

n    Species of Haemophilus and Neisseria.

p    comprised of sheep blood that provides

n    factors X (hemin)

n    V (nicotinamide adenine dinucleotide [NAD])

n    special growth factor requirements of Haemophilus influenzae, Neisseria meningitidis and Neisseria gonorrhoeae.

p    primary plating medium for any specimen which may contain fastidious organisms

n    spinal fluids, eye cultures, gonococcal cultures.

p    does not reveal hemolysis data

n    differentiation among species of Haemophilus uses other tests.

Haemophilus influenzae

p   growth on chocolate agar

p   moist, smooth colonies.

Neisseria gonorrhoeae

p   growth on chocolate agar

p   waxy, tan colonies.

 

Properties Useful in Distinguishing Haemophilus Species

p   growth factor requirements

n   species differ in their requirement for X factor and/or V factor for growth

p  H. influenza requires both X and V factors.

p  Haemophilus parainfluenzae only requires X factor.

 

Bordetella pertussis

p    encapsulated, strict aerobes.

p    sensitive to environmental conditions.

p    causes whooping cough

p    diagnosis by nasal swab

p    Growth is

n    very slow (4 - 7 days)

n    requires presence of a high concentration of blood (20 - 30%).

n    colonies like mercury droplets on selective agar

p        Special medium for isolation:

n        Bordet-Gengou medium

p      selective medium used for isolation and growth of Bordetella pertussis from clinical specimens

§       Diagnosis of whooping cough

p      Contains

§       blood (provides nutrients)
§       starch (absorbs and neutralizes inhibitors of growth)
§       Penicillin to inhibit other respiratory flora

p        Specific identification employs immunologic techniques

n        agglutination or fluorescent antibody.

 

Campylobacter jejuni

p        does not grow on MacConkey agar

n        require special media and high carbon dioxide concentrations for growth

p        acquire by eating undercooked chicken or drinking contaminated milk and water.

n        Infection ŕ gastrointestinitis (fever, cramps, and bloody diarrhea).

p     curved rods with characteristic "sea gull" and wavy morphology

p     Microaerophilic

n    need high concentration CO2, low concentration O2

p     Thermophilic

n    optimal growth 42°C

p     Fastidious

n    blood or serum normally required

p     needs antibiotic-containing selective medium

p     grows in colonies resembling water droplets

p     Isolated using Campy blood agar

Campy-BAP

p    blood agar

p    contains several antibiotics

n    inhibit growth of Gram-positive and most Gram-negative bacteria

p    Procedure:

n    plate is inoculated

n    placed in a microaerophilic environment

p   sealed bag containing high carbon dioxide concentrations and low oxygen concentrations.

 

Organisms which GROW on MacConkey agar

Properties Useful in Distinguishing among the Enterobacteriaceae and the Enterobacteriaceae from Pseudomonas

p  Properties observed on simple media:

n   Enterobacteriaceae and Pseudomonas

p Both grow on simple media and on a selective/differential media

p MacConkey agar

§   differentiates among bacterial species based on their ability to utilize lactose

Other Properties

p   PIGMENT PRODUCTION

n   Some bacilli produce characteristic pigments which aid in their identification

p  Pseudomonas aeruginosa

p  Serratia marcescens

p   ENCAPSULATION

p   SWARMING

Pseudomonas aeruginosa

p    Major cause of nosocomial infections.

n    Targets immunocompromised individuals, burn victims, and individuals on respirators or with indwelling catheters.

p    Colonize lungs of cystic fibrosis patients.

p    Most frequently isolated non-fermenter

p    Distinguish from other species of Pseudomonas:

n    Can grow at 42 °C

n    Produces a greenish pigment (pyocyanin) and a fluorescent pigment

n    Has characteristic fruity odor

p    Distinguish from Enterobacteriaceae

n    None of the Enterobacteriaceae produces pigment at 37°C

p    produces a green to blue, water-soluble pigment called pyocyanin.

p    also produces a product called fluorescein

n    fluoresce under short wavelength (254nm) ultraviolet light.

Serratia marcescens

p    characteristic red colonies due to production of a water insoluble red pigment, prodigiosin

Encapsulation

p    a number of enteric bacteria produce capsules

n    resulting colonies may appear mucoid

 

Swarming

-many bacilli of the gastrointestinal tract are motile but the programmed wave-like movement of the bacteria is observed only with Proteus species

 

Properties observed on selective and differential agars

p        MacConkey agar

n        inhibitory for gram positive organisms

n        contains lactose as a carbon source

p      ability of various enteric bacteria to use lactose serves as a means of distinguishing among them.

n        Lactose utilization

p      detected by indicator dye

§       turns red below pH 7
§       colorless above pH 7)

 

Double Sugar Iron Agar Reactions

p    Differential agar slants that contain

n    more than one sugar (lactose and glucose in a 10:1 ratio)

n    ferric salt

n    Indicator

p   phenol red ( yellow below pH7, red above).

 

p    In these slants both respiration (aerobic) and fermentation (anerobic) growth can take place.

 

p    very useful media for distinguishing among these organisms.

Double Sugar Iron Agar slant

p         inoculated by stabbing into the butt of the tube with a needle, withdrawing the needle and streaking the surface of the slant

p         Results:

p        Organisms unable to use lactose

p       anaerobic fermentation (in the butt) of available glucose

p       acid pH change confined to the butt .

p        When both lactose and glucose used

p       acid pH change throughout tube.

p        Organisms produce hydrogen sulfide and /or carbon dioxide gases

p       observed as bubbles or breaks in the agar

p       hydrogen sulfide production - formation of black compound, FeS

Escherichia coli

p   facultative anaerobes

p   ferments both glucose and lactose

p   produces gas, does not produce hydrogen sulfide

p    Similar results for Enterobacter aerogenes and Klebsiella pneumoniae

Salmonella enteritidis

p   ferment glucose but not lactose

p   produces both hydrogen sulfide and gas.

Salmonella typhi

p   ferment glucose but not lactose

p   produces hydrogen sulfide

p   does not produce gas.

Shigella boydii

p   ferment glucose but not lactose

p    does not produce gas or hydrogen sulfide

p   Other bacteria:

n   Yersinia enterocolitica

n   Serratia marcescens

Proteus vulgaris

p   ferment glucose but not lactose

p   produces hydrogen sulfide, no gas

Pseudomonas aeruginosa

p   does not ferment either glucose or lactose

p   does not produce H2S nor gas

ENTEROTUBE REACTIONS

p   another set of media to differentiate among these genera

n   commercially available Enterotube II (Roche Diagnostics, Montclair,N.J)

p   Enterotube® II contains

n   12 different agars that carry out 15 standard biochemical tests