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Botany 1050

Introduction to Botany

Spring 2008

 

ENERGY AND MOVEMENT


I. Energy

A. Organisms are ordered states of matter and a constant supply of energy is required to maintain life

B. Energy = capacity to do work, may be chemical, mechanical, electrical or heat

1. Energy is usually measured in calories:

a. 1 calorie = amount of energy required to heat 1 gm of water from 14.5oC to 15.5oC at standard pressure

b. Note that the public uses the "capital C" Calorie = kilocalorie (1,000 "small c" calories)

C. Virtually all energy on earth comes from sunlight

1. Plants use energy from the sun to make the bonds which hold organic molecules together

D. Chemical reactions:

1. Exergonic reactions yield energy

2. Endergonic reactions require energy

II. Laws of thermodynamics

A. First law - energy can neither be created nor destroyed, it can only be redistributed

1. This means there is a finite amount of energy in the universe but it can change form

B. Second law - physical and chemical processes proceed in such a way that the entropy of the universe increases

1. Entropy = disorder or randomness

C. Since organisms are ordered states of matter, it takes a constant input of energy to keep them together

D. However, as a consequence of the second law energy transformations can not be 100% efficient because energy is lost to the environment

1. Only perhaps 25% of potential energy in gasoline is converted to move a car; rest is lost as heat

2. In living organisms the energy loss is most often as heat, e.g. when muscles convert chemical energy in ATP to mechanical energy, some is lost as heat

III. Redox reactions

A. Energy transformations in living systems involve the transfer of electrons and protons [H+] from one energy level to another, or from one atom or molecule to another

B. Reactions involving electron transfer(s) are called reduction or oxidation (REDOX) reactions:

1. Oxidation = loss of electrons, e.g. Na to Na+

2. Reduction = gain of electrons, e.g. Cl to Cl-

IV. ATP (adenosine triphosphate)

A. Virtually all energy on earth comes from sunlight

B. Plants use energy from the sun to make the bonds which hold organic molecules together

C. When these bonds are broken the energy is transferred to ATP

D. The ATP is then moved about cells and organisms to power their needs

E. Structure of ATP  

1. Adenine

2. Ribose

3. Three phosphate

F. The terminal (3rd) phosphate bond is a special high energy bond

G. Recall that mitochondria are cellular powerhouses

1. Glucose from the foods you eat enter the mitochondria

2. When the glucose bonds are broken their energy is used to add the third phosphate to ADP (adenosine diphosphate) converting it to ATP

3. Since a phosphate is added this is called phosphorylation

4. The ATP is moved to where energy is needed and the terminal phosphate is cleaved off to provide energy

5. The resulting ADP then goes back to the mitochondria to be "recharged" into ATP

a. ATP is like a portable rechargeable battery

b. It is estimated that the human body cycles an average of 40 kg (88 lb.) of ATP into ADP per day!

V. Enzymes

A. In living organisms some chemical reactions take place in which energy is passed from one molecule to another via metabolic pathways

1. Metabolic pathway = ordered series of chemical reactions, each generally mediated by a specific enzyme

2. Metabolism = the sum total of the chemical reactions within an organism

a. Anabolic reactions build molecules

b. Catabolic reactions break down molecules

B. Virtually all chemical reactions within organisms are mediated by enzymes

1. Enzymes = large globular proteins from 12,000 to 1 million molecular weights that act as catalysts

a. Catalysts = substances that accelerate chemical reactions but which remain unchanged or unused in the process

C. How enzymes work

1. To go from reactants to products the chemical bonds in the reactants must be broken so that new ones can be formed in the product. E.g. a condensation reaction to make a polymer

2. Before this can happen the reactants must collide with each other sufficiently to distort their bonds to form an intermediate spring-like transition state

3. Activation energy = the energy required to make a collision sufficient enough to form the transition state

4. Enzymes function by lowering the activation energy necessary for a reaction to take place

5. Enzymes have an active site into which the substrates fit, forming an enzyme-substrate complex

6. The active site orients the substrates near each other and subtly changes their shapes, straining their bonds and helping them reach the transition state. This lowers the energy of activation making it easier for the reactants to form products

D. Enzyme reactions are greatly influenced by both temperature and pH

1. Most enzymes only function within very narrow ranges of temperature or pH

2. This is because their shape is distorted so they don’t function

a. Siamese cats have dark ears, nose, paws and tails because those parts are colder than rest of the body. The enzyme responsible for the dark pigment melanin only functions at lower temperatures 

VI. Diffusion

A. Cells are ordered states of matter, mostly in water solutions, separated from their environment via selectively permeable membranes. Some substances can pass through them and some can not

B. The movement of substances is the result of internal energy which keeps them in constant motion and concentration gradients

1. Concentration gradient = differences in the concentration or pressure of materials in one part of a contained area compared to another

C. Because of entropy materials tend to move down concentration gradients, i.e. from regions of higher concentrations to regions of lower concentrations, e.g. cream in coffee

D. Materials move down concentration gradients because under high concentrations molecules collide with each other more than they would if spread over a larger area

E. Diffusion = tendency of materials to move from areas of high concentration to areas of low concentrations

F. Many materials, particularly water, enter and leave cells via simple diffusion due to a concentration gradient on either side of the membrane

G. Passive transport = the movement of a substance into or out of a cell due to a concentration gradient. It is passive because it spontaneously happens with no input of energy

VI. Osmosis and Tonicity

A. Biological membranes are usually selectively permeable, permeable to many small molecules but not larger or electrically charged molecules

B. Osmosis = the movement of water through a selectively permeable membrane in response to a concentration or pressure gradient

1. Water moves from regions of higher concentration (high water potential) or pressure to where it is present in lower concentrations

C. Tonicity = relative concentrations of solutes in two solutions

1. Solute = a substance dissolved in a solvent. E.g. throw some salt into water - the water is the solvent and the salt is the solute

2. Tonicity is usually used to refer to concentration differences between cells and their environment

3. There are three types of solutions:

a. Isotonic solution = solute concentration inside and outside cells is equal. Therefore there is no net movement of water into or out of cell

b. Hypotonic (low) solution = low in solutes (high in water molecules). Therefore water moves into cell

c. Hypertonic (high) solution = high in solutes (low in water molecules). Therefore water moves out of cell

D. When water moves into a cell via osmosis it can create osmotic pressure, eventually causing it or its plasma membrane to burst

1. Lysis = bursting of a cell or plasma membrane

E. Recall that plants have a large central vacuole. Osmotic pressure is what keeps plant cells turgid (rigid)

1. Turgor pressure = the pressure that develops in plant cells as a result of osmosis

VII. Transport across membranes

A. Often cells must transport materials against a concentration gradient, this takes energy so it is called active transport

B. Recall that the lipid bilayer also contains embedded proteins

C. Active transport across membranes is usually accomplished by these membrane transport proteins

1. With an input of energy these proteins may change shape and act as carriers by bringing molecules inside the cell

 

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